BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E10LP1|AL425554
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1792 1628 0.0
>3x_Contig1792
Length = 28468
Score = 1628 bits (820), Expect = 0.0
Identities = 891/912 (97%), Gaps = 2/912 (0%)
Strand = Plus / Plus
Query: 45 tatttttttttgttagtatctatgtggttgtggtttgacggttaactccta-gcttgcct 103
||||||||||| || || | | ||||||||||||||||||| || || | | |||| |
Sbjct: 60 tattttttttttttcgtctatctgtggttgtggtttgacgggtacctttttcgtttgctt 119
Query: 104 tgatttagtttgacaca-taagccagcagttgtcaatacagggaacacagaaaagaattg 162
|| |||||||||||||| || || || |||||| | ||||||||||||||||||||||||
Sbjct: 120 tgctttagtttgacacactacgcgagtagttgttactacagggaacacagaaaagaattg 179
Query: 163 atggttacaattttcacggtgtactccgtagtttcctcttctatgggcagaagttaactc 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atggttacaattttcacggtgtactccgtagtttcctcttctatgggcagaagttaactc 239
Query: 223 gagtgtatgatttcctagtttcaacatactaaaaagttgtttacatctttgggctgaatg 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gagtgtatgatttcctagtttcaacatactaaaaagttgtttacatctttgggctgaatg 299
Query: 283 ccatgtttaacaagctgaacacatgatttccaaattctctttctcaacttgagttccttt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccatgtttaacaagctgaacacatgatttccaaattctctttctcaacttgagttccttt 359
Query: 343 tctattagtaggcggctatcttgaagacatttaattatattattcgaggcgaaatccgtg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctattagtaggcggctatcttgaagacatttaattatattattcgaggcgaaatccgtg 419
Query: 403 ggagagtctgtcaagtattttacgttattatccaattcttcaatcttcttatgggcttgg 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggagagtctgtcaagtattttacgttattatccaattcttcaatcttcttatgggcttgg 479
Query: 463 tcaataatttcgactaattcaatgtttgagggttctgccattagtaatgccgtcttagtt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcaataatttcgactaattcaatgtttgagggttctgccattagtaatgccgtcttagtt 539
Query: 523 gaccaagcctgacgttcagcaagtactttagcgtattcttcatttaattcttgaatacct 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaccaagcctgacgttcagcaagtactttagcgtattcttcatttaattcttgaatacct 599
Query: 583 tcaaaactgaagtctttactgtcacgattctcttctaactgaatttcgttacggacataa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcaaaactgaagtctttactgtcacgattctcttctaactgaatttcgttacggacataa 659
Query: 643 attgatattttaccgaattgtttacaattgatcttcttttcttcaactaaaacttccaaa 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 attgatattttaccgaattgtttacaattgatcttcttttcttcaactaaaacttccaaa 719
Query: 703 gctttaactgcatttgccttcgatactgcattgtgtaaattttggataatgtcgttgatg 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gctttaactgcatttgccttcgatactgcattgtgtaaattttggataatgtcgttgatg 779
Query: 763 gcaaaaggcttatagttttcatttaaataatttagaatcaaagtttcagctttaaaaact 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gcaaaaggcttatagttttcatttaaataatttagaatcaaagtttcagctttaaaaact 839
Query: 823 tgttagtaaacgataaaaatgttacatcgcagcatagtgtagcgtatatcacttaccatc 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tgttagtaaacgataaaaatgttacatcgcagcatagtgtagcgtatatcacttaccatc 899
Query: 883 ttcacctttcacctgtgttggaggcattttgactgaacataccctggtgctaggtaaatt 942
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ttcacctttcacctgttttggaggcattttgactgaacataccctggtgctaggtaaatt 959
Query: 943 tattcctgttta 954
||||||||||||
Sbjct: 960 tattcctgttta 971
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9067
Number of Sequences: 1807
Number of extensions: 9067
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)